“plot_model() 在主题功能中一直返回 NULL”

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英文:

plot_model() keeps returning NULL in theme features

问题

I am making use of the plot_model() predictive function for a multiple linear regression and am not able to modify aesthetics. I have read both that it is a part of the sjplot package as well as a wrapper for ggplot. While I have gotten pretty proficient in modifying/debugging ggplot aesthetics, I am finding this not working here.

It plots just fine in my code as is. I've put placeholder names for the variables.

library(sjPlot)
library(performance)
library(ggplot2)
library(sjmisc)

setwd("C:/Users/directory/")

df = read.csv('example.csv')
df$id = factor(df$id)
df$course = factor(df$course)

lm_mod = lm(data = df, score ~ var1 + var2 + var3)
summary(lm_mod)

prediction = plot_model(lm_mod, 
          type = "pred", 
          show.data = TRUE,
          dot.size = 1
          )

As soon as I add themes, it returns NULL.

prediction + set_theme(base = theme_minimal())

I want to adjust the axis scale/limits to match my other ggplot-made figures. The text size of the axis I would like to fix also. Image below, with the variable names removed

“plot_model() 在主题功能中一直返回 NULL”

If I try anything from sjplot or ggplot to modify the aesthetics/themes, they all universally return "NULL." Some examples below:

> prediction + font_size(axis_title.x = 28)
NULL
> prediction + font_size(28)
NULL
> prediction + set_theme(base = theme_minimal())
NULL
> prediction + theme_sjplot(base_size = 24, base_family = "")
NULL
> prediction + theme(
+   text = element_text(size = 22),
+   axis.title = element_text(size = 28, face = "bold"),
+   axis.text = element_text(size = 24),
+   axis.line = element_line(colour = "black", size = 1, linetype = "solid"),
+   plot.title = element_text(size = 28, face = "bold", vjust = 2, hjust = 0.5)
+ )
NULL

I have read related posts. Please help! I am very stuck trying to fix this.

英文:

I am making use of the plot_model() predictive function for a multiple linear regression and am not able to modify aesthetics. I have read both that it is a part of the sjplot package as well as a wrapper for ggplot. While I have gotten pretty proficient in modifying/debuggin ggplot aesthetics, I am finding this not working here.

It plots just fine in my code as is. I've put placeholder names for the variables.

library(sjPlot)
library(performance)
library(ggplot2)
library(sjmisc)

setwd("C:/Users/directory/")

df=read.csv('example.csv')
df$id=factor(df$id)
df$course=factor(df$course)

lm_mod=lm(data=df, score~var1+var2+var3)
summary(lm_mod)

prediction = plot_model(lm_mod, 
          type="pred", 
          show.data=TRUE,
          dot.size = 1,
          )

prediction

As soon as I add themes, it returns NULL.

prediction + set_theme(base = theme_minimal())

I want to adjust the axis scale / limits to match my other ggplot made figures. The text size of the axis I would like to fix also. Image below, with the variable names removed

“plot_model() 在主题功能中一直返回 NULL”

If I try anything from sjplot or ggplot to modify the aesthetics/themes, they all universally return "NULL." Some examples below:

> prediction + font_size(axis_title.x=28)
NULL
> prediction + font_size(28)
NULL
> prediction + set_theme(base = theme_minimal())
NULL
> prediction + theme_sjplot(base_size = 24, base_family="")
NULL
> prediction + theme(text=element_text(size=22),  
+                    axis.title = element_text(size=28, 
+                                              face="bold" ),  
+                    axis.text = element_text(size=24), 
+                    axis.line = element_line(colour = "black", 
+                                             size = 1, 
+                                             linetype = "solid"),
+                    plot.title = element_text(size=28,
+                                              face="bold",
+                                              vjust=2,
+                                              hjust=0.5))
NULL

I have read related posts. Please help! I am very stuck trying to fix this.

答案1

得分: 1

根据帮助页面?plot_model中的数值部分,取决于绘图类型,plot_model()会返回一个ggplot对象或这类对象的列表。

以下是一个简单的示例:

library(sjPlot)
library(ggplot2)

lm1 <- lm(mpg ~ wt, data = mtcars)

p1 <- plot_model(lm1)
p2 <- plot_model(lm1, type = "pred")

class(p1)
[1] "gg"     "ggplot"

class(p2)
[1] "list"

因此,p1是一个ggplot对象,你可以这样做:

p1 + theme_bw()

但是p2是一个具有名称的列表。它的名称来自模型中的自变量。如果你尝试为列表添加主题,你将会得到NULL。

names(p2)
[1] "wt"

p2 + theme_bw()
NULL

要访问列表中的ggplot部分,你可以这样做:

p2$wt + theme_bw()

或者这样:

p2[[1]] + theme_bw()

如果有多个自变量,你会得到一个与每个自变量对应的列表元素。在你的情况下:

prediction$var1
prediction$var2
prediction$var3
英文:

If you look at the help page ?plot_model, under Value it states:

>Depending on the plot-type, plot_model() returns a ggplot-object or a list of such objects.

Here's a simple example:

library(sjPlot)
library(ggplot2)

lm1 &lt;- lm(mpg ~ wt, data = mtcars)

p1 &lt;- plot_model(lm1)
p2 &lt;- plot_model(lm1, type = &quot;pred&quot;)

class(p1)
[1] &quot;gg&quot;     &quot;ggplot&quot;

class(p2)
[1] &quot;list&quot;

So p1 is a ggplot object and you could do this:

p1 + theme_bw()

But p2 is a named list. It gets its name from the independent variable in the model. You'll get NULL if you try to add themes to a list.

names(p2)
[1] &quot;wt&quot;

p2 + theme_bw()
NULL

So to access the ggplot part of the list, you can do this:

p2$wt + theme_bw()

or this:

p2[[1]] + theme_bw()

With more than one independent variable, you'll get a list element for each one. In your case:

prediction$var1
prediction$var2
prediction$var3

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  • 本文由 发表于 2023年7月18日 08:55:44
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