‘yaml_body’ 不是从 ‘namespace:xfun’ 导出的对象。

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英文:

'yaml_body' is not an exported object from 'namespace:xfun'

问题

我正在尝试为心脏数据集中的患者运行Kaplan-Meier曲线,该数据集是R中生存包的一部分,使用以下模型。每当我尝试运行代码时,我都会收到下面的错误消息。

错误:'yaml_body' 不是 'namespace:xfun' 的导出对象

以下是我正在运行的模型的代码。

model1 <- survfit(Surv(year, event) ~ surgery, data = heart)

summary(model1)

以下是我用于绘制Kaplan-Meier曲线以及相应错误的代码。

ggsurvplot(
  model1,
  pval = TRUE,
  conf.int = TRUE,
  risk.table = TRUE,
  ggtheme = theme_bw(),
  surv.median.line = "hv",
  palette = c("blue", "#FF0000")
)

错误:'yaml_body' 不是 'namespace:xfun' 的导出对象
英文:

I am trying to run a Kaplan-Meier curve for patients in the Heart dataset that is part of the survival package in R using the model below. Whenever I try to run the code, I am receiving the following error below.

Error: 'yaml_body' is not an exported object from 'namespace:xfun'

Below is the code for the model I am running.

model1 &lt;- survfit(Surv(year, event) ~ surgery, data = heart)

summary(model1)

Below is the code I am using to plot the Kaplan-Meier curve and the corresponding error.

ggsurvplot(
  model1,
  pval = TRUE,
  conf.int = TRUE,
  risk.table = TRUE,
  ggtheme = theme_bw(),
  surv.median.line = &quot;hv&quot;,
  palette = c(&quot;blue&quot;, &quot;#FF0000&quot;)
)

Error: &#39;yaml_body&#39; is not an exported object from &#39;namespace:xfun&#39;

答案1

得分: 3

尝试安装最新版本的'xfun'包。

英文:

Try to install the newest version of the 'xfun' package

答案2

得分: 1

去工具,安装包,然后在包中输入xfun。

英文:

Go to tools, install packages and type xfun in package

答案3

得分: 0

我也遇到过这个问题,并发现是因为删除了 risk.tableggsurvplot 才能正常工作。我还没有找到使用 ggsurvplot 生成带风险表的图表的方法。

英文:

I also come across this issue, and I found it was due to the risk.table that ggsurvplot worked after being deleted. I have not found a way to generate a plot with risk table using ggsurvplot yet.

答案4

得分: 0

根据@Flip和@Reeshu的建议,对我来说重新安装“xfun”包起作用了。
我首先手动卸载了xfun包:
‘yaml_body’ 不是从 ‘namespace:xfun’ 导出的对象。

但后来只需安装“xfun”包就解决了我所有的问题。
我正在使用R.4.2.2。

英文:

As @Flip and @Reeshu sugested, it worked for me reinstall "xfun" package.
I had first to uninstall manually the xfun package :
‘yaml_body’ 不是从 ‘namespace:xfun’ 导出的对象。

But later just install the package "xfun" solved all my issues.
I am working with R.4.2.2.

答案5

得分: 0

我最近在使用quarto文档中的gt包生成表格时遇到了相同的问题。重新安装xfun包并在渲染文档之前加载它解决了这个问题。

英文:

I recently had the same issue while generating tables using gt package in a quarto document.
Reinstalling the xfun package and loading it before rendering the document fixed the issue.

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  • 本文由 发表于 2023年4月10日 21:46:52
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