snakemake

英文: Access working directory from bash script 问题 I'd like to access the snakemake working directory ...

英文: Snakemake expand on a dictionary, keeping wildcards 问题 我有一个类似以下的字典： ```python data = { "grou...

英文: Snakemake subtract a mask from two channels 问题 I have a project of several microscopy recordings...

英文: How to make Snakemake run a rule once for all matching outputs, not once for each wildcard match...

英文: What is the proper way to access values in nested dictionaries with Snakemake? 问题 以下是翻译好的部分： 我经常...

英文: How to resolve wildcard error in Snakemake? 问题 抱歉，您提供的内容包含代码和错误信息，我可以帮助您翻译部分文本，但我无法直接解决代码错误。以下是翻...

英文: Target rules may not contain wildcards. Please specify concrete files or a rule without wildcard...

英文: How to make Snakemake wildcard work for empty string? 问题 我期望Snakemake允许通配符为空字符串，然而，事实并非如此。 如何使通配...

英文: execute a rule that the wildcard is obtained via the params in the rule 问题 我有一个包含通配符的规则，通配符是从参数中...

英文: Snakemake syntax for multiple outputs with the use of checkpoint 问题 I'm using snakemake to build...